Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865123.1_cds_XP_016516223.1_28487
CDS Infomation

[gene=LOC107832842] [db_xref=GeneID:107832842] [protein=beta-glucosidase 18-like] [protein_id=XP_016516223.1] [location=join(4345..4569,4669..4735,5021..5079,20583..20658,20787..20861,21536..21623,21838..22090,22604..22719,22936..23185,23284..23386,24035..24143,24437..24632)] [gbkey=CDS]
Sequence

ATGAGTATTTTCTCCATTGCATTCTTAAGCACAGTAATTTATTCTCTAAGTATAATGGAA
TCAATTGCAATGATTTGGCTTGTAATATTTGCACTAAGTGTGTCTTTTCCTGATTTCATG
GTATCATGTTCTCAGACAGAAAATTACCTTAGTGGCAAAGAATATCCAAACTCAGTTTCA
TTTCCAAGCACTTTCTTGTTTGGAACAGCCTCTTCTAGTTACCAGTTTGAAGGAGCTTTC
CTTAGTGATGGAAAAGGCCTTAACAATTGGGATGTTTTTACTCATGAAGTTGGGCACATA
GCAGATGGAAGTAATGGAGATATTGCTCTCGACCATTACAACCGATATCGGGAGGATATC
AAGCTCATGGAAGATATGGGAGTGGATAGCTTTCGTTTCTCTATTTCATGGGCAAGAATT
CTGCCTAATGGGATGTATGGAGATATCAATATAGCTGGAATTCAGCATTACAGTAAGCTG
ATTAATGCACTCATACAGAAAGGTATCGAACCATTTGTCACGTTAACACATTATGATATA
CCTCAAGAACTTGAAGACAGATATGGAGGTTGGCTAAGTCCGAAAATACAGAGTGATTTC
AGCTATTATGCAGACATATGTTTTAAATATTTTGGAGACAGAGTTAAATACTGGGTGACT
ATGAATGAGCCAAATGTGATGGCCGTTCGCGGCTACAGATTGGGGACTTTCCCTCCAGCT
CGATGCTCTCGTTCATTTGGTAATTGCAGCGCTGGGAATTCGGAAAAGGAGCCGTTCATT
GCTGCCCACAATATGATCCTATCCCACGCCGCGGCTGCCAGCATTTACAGAACCAAATAT
CAGGAAAGACAAGGAGGTATGATTGGAATTTCTTTAAATACTCAATGGTATGAACCTTTT
AGCAATTCATCAGAAGACAAATATGCAGCTCAGAGAGCTCGATCTTTCGTTTACAACTGG
TTTTTAGACCCTATTATATTTGGAAGATATCCTGAAGAAATGCAACAAATTCTTGGAAAT
AACCTGCCTGTTTTTTCAAGCAATGATTTGAAAAAACTGAATAATGGCCTGGATTTCATT
GGCATCAATCATTACACTGCTGCTTATATAAAAGATTGCTTGTACTCCGCCTGTGAACAC
GGAACCTCTTGGTCGGAGGGTTCCTATTTTCGTACTACAGAAAAAGATGGTGTGTACATT
GGACAACCTACTACAATGGACTGGCTTTTTGTTTACCCTCAAGGGATGGAAAAGCTTGTG
ATGTACATGAAGGACAGATTCAATAACACTCCAATCATTATCACTGAAAATGGCATTGCT
GAGAGTGACAATCCAAATTCTTCTCTAGCTGATTCTCTCAACGACACTCCAAGAGTTGAA
TATATGCATAGCCACTTGAATTCTTTAGCAAATGCAATAAGGGAAGGTGCAGATGTGAGG
GGCTACTTCGCTTGGTCATTGCTCGACAACTTTGAATGGTTAGAAGGGTATACAAAAAGA
TTTGGATTGCATTATGTCAATTTTACCAATCTCGAGAGAACTCCAAAATTATCAGCCACT
CGGTGTAAGGAGCTCATGTCTAATTTTCAAGGACAGATAGCAAGATATACAGCATAA

Peptide Sequence

PEP ID

XP_016516223.1
PEP Infomation

PREDICTED: beta-glucosidase 18-like [Nicotiana tabacum]
Sequence

MSIFSIAFLSTVIYSLSIMESIAMIWLVIFALSVSFPDFMVSCSQTENYLSGKEYPNSVS
FPSTFLFGTASSSYQFEGAFLSDGKGLNNWDVFTHEVGHIADGSNGDIALDHYNRYREDI
KLMEDMGVDSFRFSISWARILPNGMYGDINIAGIQHYSKLINALIQKGIEPFVTLTHYDI
PQELEDRYGGWLSPKIQSDFSYYADICFKYFGDRVKYWVTMNEPNVMAVRGYRLGTFPPA
RCSRSFGNCSAGNSEKEPFIAAHNMILSHAAAASIYRTKYQERQGGMIGISLNTQWYEPF
SNSSEDKYAAQRARSFVYNWFLDPIIFGRYPEEMQQILGNNLPVFSSNDLKKLNNGLDFI
GINHYTAAYIKDCLYSACEHGTSWSEGSYFRTTEKDGVYIGQPTTMDWLFVYPQGMEKLV
MYMKDRFNNTPIIITENGIAESDNPNSSLADSLNDTPRVEYMHSHLNSLANAIREGADVR
GYFAWSLLDNFEWLEGYTKRFGLHYVNFTNLERTPKLSATRCKELMSNFQGQIARYTA

Transcript Sequence

Gene sequence data has not been registered.